| __init__(self, gui=None) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| _bias_correct(self, str img_path, str prefix) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _create_nonzero_mask(self, np.ndarray data) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _crop_to_nonzero(self, np.ndarray data, np.ndarray seg=None, int nonzero_label=-1, tuple[slice, slice, slice] bbox=None) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _load_img(self, str img_path) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _padding(self, np.ndarray data, int min_size=128) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _preprocess_modality(self, str modality, bool is_MNI, tuple[slice, slice, slice] bbox=None) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _print_action(self, str action_name) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _register_to_reference(self, str img_path, str ref, str suffix, str prefix) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _reorient_RAS(self, str img_path, str prefix) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| _z_score_norm(self, np.ndarray data, np.ndarray seg=None) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | protected |
| atlasImage (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| brain_extracter (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| clean(self, temp_dir) (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| config (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| find_nii_files(self) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| gui (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| logger (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| option (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| preprocessing_steps (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| resampler (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| run(self, str t1, str flair, str temp_dir, bool bet_only=False) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
| wrapper (defined in StrokeSegLab.preprocessing.preprocessor.Preprocessor) | StrokeSegLab.preprocessing.preprocessor.Preprocessor | |
1.12.0